Graphviz Sierra

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General¶

Worked on MacOS Sierra with Python 3.6. 3: try the following (make sure to have anaconda-client installed and updated). Pip install graphviz Tested. Binarys are at the graphviz site, but for recent versions like El Capitan, Sierra and High Sierra, macports or homebrew are recommended. Brew install graphviz This package also relies on the org-mode and dash libraries, available from melpa (M-x list-packages). Mar 09, 2019 OSはmac OS High Sierra 10.13.1. Pip install graphviz. Anacondaのjupyter notebookから使うためにバインド. Conda install -c conda-forge python-graphviz. DOI: 10.18129/B9.bioc.Rgraphviz Provides plotting capabilities for R graph objects. Bioconductor version: Release (3.13) Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Schema or Catalog name can’t be null¶

OSX Sierra, Python 2.7, Graphviz 2.38. Using pip install graphviz and conda install graphviz BOTH resolves the problem.

This means that Schema or Catalog information could not be extracted from connection.
I this case you need to add options -s[schemaName] or -cat[catalogName]
In most cases for catalog you can use -cat%
In mysql you can use same as -db

OSX¶

Graphviz¶

Graphviz

There have been lots of issue with graphviz and OSX
So install using brew brewinstallgraphviz--with-librsvg--with-pango
Depending on OSX version
Older than High Sierra, add -renderer:quartz to the commandline
High Sierra or newer, add -renderer:cairo to the commandline

General¶

Graphviz Sierra Madre

Schema or Catalog name can’t be null¶

Graphviz Sierra Madre

Graphviz Sierra

This means that Schema or Catalog information could not be extracted from connection.
I this case you need to add options -s[schemaName] or -cat[catalogName]
In most cases for catalog you can use -cat%
In mysql you can use same as -db

“Cannot enlarge memory arrays” when using viz.js¶

Graphviz Server

According to viz.js documentation the memory is default 16MB this should be enough.
We have increased this to 64 MB if you receive this error, please report this to us.

I just receive a cryptic error like “ERROR - null”¶

The code has previously avoided to log stracktraces, we now log them but only when
-debug is used. So any cryptic error can be enhanced with stacktrace by running
SchemaSpy with the argument -debug

Graphviz Sierra Mesa

OSX¶

Graphviz¶

There have been lots of issue with graphviz and OSX
So install using brew brewinstallgraphviz--with-librsvg--with-pango
Depending on OSX version
Older than High Sierra, add -renderer:quartz to the commandline
High Sierra or newer, add -renderer:cairo to the commandline